Publicações
Our Curriculum Overview
A Commitment to Excellence
2024
MARTINS, INGRID B. S.; VIEGAS, RAFAEL G.; SANCHES, MURILO N.; de Araujo, Alexandre S.; LEITE, VITOR B. P.
Probing Mastoparan-like Antimicrobial Peptides Interaction with Model Membrane Through Energy Landscape Analysis
JOURNAL OF PHYSICAL CHEMISTRY B. , v.128, p.163 – 171, 2024
2023
HERNÁNDEZ GONZÁLEZ, JORGE ENRIQUE; DE ARAUJO, ALEXANDRE SUMAN
Alchemical Calculation of Relative Free Energies for Charge-Changing Mutations at Protein-Protein Interfaces Considering Fixed and Variable Protonation States
Journal of Chemical Information and Modeling. , v.63, p.6807 – 6822, 2023
TEIXEIRA, OLÍVIA; MARTINS, INGRID BERNARDES SANTANA; FROES, THAMIRES QUADROS; DE ARAÚJO, ALEXANDRE SUMAN; NONATO, MARIA CRISTINA
Kinetic and structural studies of Mycobacterium tuberculosis dihydroorotate dehydrogenase reveal new insights into class 2 DHODH inhibition
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS. , v.1867, p.130378 – , 2023
2022
CAMILO, CARLOS ROBERTO DE SOUZA; RUGGIERO, JOSÉ ROBERTO; DE ARAUJO, ALEXANDRE SUMAN
A Method for Detection of Water Permeation Events in Molecular Dynamics Simulations of Lipid Bilayers
Brazilian Journal of Physics. , v.52, p.62 – , 2022
2021
ALVAREZ, LILIAN HERNÁNDEZ; OLIVEIRA, ANTONIO B.; GONZÁLEZ, JORGE ENRIQUE HERNÁNDEZ; CHAHINE, JORGE; PASCUTTI, PEDRO GERALDO; DE ARAUJO, ALEXANDRE SUMAN; DE SOUZA, FÁTIMA PEREIRA
Computational study on the allosteric mechanism of Leishmania major IF4E-1 by 4E-interacting protein-1: Unravelling the determinants of m7GTP cap recognition
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL. , p.2027 – 2044, 2021
ALVARES, D. S.; MARTINS, I. B. S.; VIEGAS, T. G.; Palma, M. S.; de ARAUJO, A. S.; CARVALHO, S. J.; RUGGIERO NETO, J
Modulatory Effects of Acidic pH and Membrane Potential on the Adsorption of pH-Sensitive Peptides to Anionic Lipid Membrane
Membranes. , v.11, p.307 – , 2021
MARTINS, INGRID BERNARDES SANTANA; VIEGAS, TAISA GIORDANO; DOS SANTOS ALVARES, DAYANE; DE SOUZA, BIBIANA MONSON; PALMA, MÁRIO SÉRGIO; RUGGIERO NETO, JOÃO; DE ARAUJO, ALEXANDRE SUMAN
The effect of acidic pH on the adsorption and lytic activity of the peptides Polybia-MP1 and its histidine-containing analog in anionic lipid membrane: a biophysical study by molecular dynamics and spectroscopy
AMINO ACIDS. , v.53, p.753 – 767, 2021
2018
DA COSTA ZONETTI, LUIZ FERNANDO; COUTINHO, MILENA CONCEICAO; DE ARAUJO, ALEXANDRE SUMAN
Molecular aspects of the dengue virus infection process, a review
PROTEIN AND PEPTIDE LETTERS. , v.25, p.712 – 719, 2018
2016
CARUSO, ÍCARO PUTINHON; FILHO, JOSÉ MARIA BARBOSA; DE ARAÚJO, ALEXANDRE SUMAN; DE SOUZA, FÁTIMA PEREIRA; FOSSEY, MARCELO ANDRÉS; CORNÉLIO, MARINÔNIO LOPES
An integrated approach with experimental and computational tools outlining the cooperative binding between 2-phenylchromone and human serum albumin
FOOD CHEMISTRY. , v.196, p.935 – 942, 2016
ZANIN, LUCIANA PUIA MORO; DE ARAUJO, ALEXANDRE SUMAN; JULIANO, MARIA APARECIDA; CASELLA, TIAGO; NOGUEIRA, MARA CORREA LELLES; RUGGIERO NETO, JOÃO
Effects of N-terminus modifications on the conformation and permeation activities of the synthetic peptide L1A
Amino Acids (Wien. Print). , p.1433 – 1444, 2016
ARAUJO, GABRIELA C.; SILVA, RICARDO H. T.; SCOTT, LUIS P. B.; Araujo, Alexandre S.; SOUZA, FATIMA P.; DE OLIVEIRA, RONALDO JUNIO
Structure and functional dynamics characterization of the ion channel of the human respiratory syncytial virus (hRSV) small hydrophobic protein (SH) transmembrane domain by combining molecular dynamics with excited normal modes
JOURNAL OF MOLECULAR MODELING. , v.22, p.286 – , 2016